Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AUTS2 ENSBTAG00000002083

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Description

activator of transcription and developmental regulator AUTS2 [Source:VGNC Symbol;Acc:VGNC:26352]

Location

Primary_assembly 25: 29,783,195-30,996,953 reverse strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117208.1	AUTS2-203	5082	1293aa	ENSBTAP00000080295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SD94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000002697.7	AUTS2-204	4992	1263aa	ENSBTAP00000002697.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPK9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000083495.2	AUTS2-202	4920	1239aa	ENSBTAP00000057276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQL9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000067784.2	AUTS2-201	3576	791aa	ENSBTAP00000069166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDX4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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