Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GJA1 ENSBTAG00000001835

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Description

gap junction protein alpha 1 [Source:VGNC Symbol;Acc:VGNC:29370]

Location

Primary_assembly 9: 29,738,659-29,761,833 reverse strand.

ARS-UCD2.0:CM008176.2

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102239.1	GJA1-202	7338	383aa	ENSBTAP00000101372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654IE56 P18246	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000002398.7	GJA1-201	6672	383aa	ENSBTAP00000002398.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654IE56 P18246	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000103662.1	GJA1-203	1619	383aa	ENSBTAP00000098299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654IE56 P18246	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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