Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM1 ENSBTAG00000001612

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Description

LSM1 homolog, mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:31050]

Location

Primary_assembly 27: 33,337,991-33,348,726 reverse strand.

ARS-UCD2.0:CM008194.2

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000002113.3	LSM1-202	927	133aa	ENSBTAP00000002113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5E9Z8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000121962.1	LSM1-201	1311	44aa	ENSBTAP00000099822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TS05	-

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Summary

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