Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: GPATCH2 ENSBTAG00000001574

.

Description

G-patch domain containing 2 [Source:VGNC Symbol;Acc:VGNC:29516]

Location

Primary_assembly 16: 20,928,591-21,125,747 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000087458.2	GPATCH2-202	2687	529aa	ENSBTAP00000064690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000002064.6	GPATCH2-204	3234	377aa	ENSBTAP00000002064.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLA7	-
ENSBTAT00000091149.1	GPATCH2-203	2576	492aa	ENSBTAP00000097392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TM61	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000114238.1	GPATCH2-201	2475	526aa	ENSBTAP00000087617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWK6	-

.

Summary

.

.