Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Phenotypes
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Gene: CENPC ENSBTAG00000001323

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Description

centromere protein C [Source:VGNC Symbol;Acc:VGNC:27174]

Location

Primary_assembly 6: 83,182,503-83,289,898 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 5 transcripts (splice variants) and 124 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000128335.1	CENPC-201	3620	983aa	ENSBTAP00000098960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TP04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000112416.1	CENPC-205	3256	953aa	ENSBTAP00000078601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYF3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000001748.6	CENPC-203	3248	902aa	ENSBTAP00000001748.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BAK5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000134807.1	CENPC-202	3244	868aa	ENSBTAP00000082639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJ84	-
ENSBTAT00000125615.2	CENPC-204	2029	466aa	ENSBTAP00000081841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S766	-

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Summary

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