Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DEPDC5 ENSBTAG00000001295

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Description

DEP domain containing 5, GATOR1 subcomplex subunit [Source:VGNC Symbol;Acc:VGNC:28006]

Location

Primary_assembly 17: 70,405,073-70,478,433 forward strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 6 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000001707.8	DEPDC5-203	5377	1602aa	ENSBTAP00000001707.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MN63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000068154.3	DEPDC5-202	5858	1569aa	ENSBTAP00000068942.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MEL7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000108073.2	DEPDC5-204	5316	1551aa	ENSBTAP00000098634.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TN02	-
ENSBTAT00000128748.2	DEPDC5-205	5293	1574aa	ENSBTAP00000085984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSI6	-
ENSBTAT00000114202.2	DEPDC5-206	5143	1524aa	ENSBTAP00000075976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RT40	-
ENSBTAT00000076690.3	DEPDC5-201	5141	1515aa	ENSBTAP00000063348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0Z4	-

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Summary

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