Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP1A1 ENSBTAG00000001246

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Description

ATPase Na+/K+ transporting subunit alpha 1 [Source:VGNC Symbol;Acc:VGNC:26282]

Location

Primary_assembly 3: 26,886,571-26,919,931 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 332 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000068959.2	ATP1A1-205	3493	1052aa	ENSBTAP00000060814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000085581.2	ATP1A1-204	3645	1021aa	ENSBTAP00000074408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08DA1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000118359.1	ATP1A1-203	3602	1021aa	ENSBTAP00000077424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXW7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000001646.8	ATP1A1-202	3406	1023aa	ENSBTAP00000001646.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MFY4 F1MI32	-
ENSBTAT00000067987.2	ATP1A1-201	3322	995aa	ENSBTAP00000069038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDM5	-

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Summary

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