Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPS6KC1 ENSBTAG00000001181

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Description

ribosomal protein S6 kinase C1 [Source:VGNC Symbol;Acc:VGNC:34148]

Location

Primary_assembly 16: 70,348,824-70,553,006 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083599.2	RPS6KC1-205	3501	1071aa	ENSBTAP00000061760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000131606.1	RPS6KC1-204	4614	1061aa	ENSBTAP00000093926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T7L6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000001565.7	RPS6KC1-201	4512	1049aa	ENSBTAP00000001565.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BB43	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000068811.2	RPS6KC1-203	4470	1031aa	ENSBTAP00000058451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LNQ1	-
ENSBTAT00000082560.2	RPS6KC1-202	4455	1030aa	ENSBTAP00000070820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NG99	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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