Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APLP1 ENSBTAG00000001151

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Description

amyloid beta like protein 1 [Source:VGNC Symbol;Acc:VGNC:26019]

Location

Primary_assembly 18: 46,566,790-46,576,565 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 3 transcripts (splice variants), 186 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000077216.3	APLP1-201	2436	643aa	ENSBTAP00000065812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N609	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000113161.2	APLP1-202	2301	598aa	ENSBTAP00000102819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZU4	-
ENSBTAT00000001531.8	APLP1-203	2273	621aa	ENSBTAP00000001531.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MIL3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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