Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCD1 ENSBTAG00000037935

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:VGNC Symbol;Acc:VGNC:34993]

Location

Primary_assembly 5: 29,798,761-29,810,207 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 4 transcripts (splice variants), 226 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000001284.5	SMARCD1-202	1619	526aa	ENSBTAP00000001284.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000120508.1	SMARCD1-201	2526	501aa	ENSBTAP00000095553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TH54	-
ENSBTAT00000103606.1	SMARCD1-203	1463	474aa	ENSBTAP00000093397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T970	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000117685.1	SMARCD1-204	1463	474aa	ENSBTAP00000074657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXW8	-

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Summary

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