Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBAP2 ENSBTAG00000000695

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Description

ubiquitin associated protein 2 [Source:VGNC Symbol;Acc:VGNC:36572]

Location

Primary_assembly 8: 75,335,468-75,454,071 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 3 transcripts (splice variants), 297 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000000930.6	UBAP2-201	4334	1137aa	ENSBTAP00000000930.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BA82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000082948.2	UBAP2-202	4328	1135aa	ENSBTAP00000061666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0X9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000070963.2	UBAP2-203	4136	1071aa	ENSBTAP00000064610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M482	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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