Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CSDE1 ENSBTAG00000000678

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Description

cold shock domain containing E1 [Source:VGNC Symbol;Acc:VGNC:27751]

Location

Primary_assembly 3: 28,579,226-28,614,815 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants) and 241 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000072611.3	CSDE1-201	4268	844aa	ENSBTAP00000072412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1ML77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000000901.7	CSDE1-202	4160	813aa	ENSBTAP00000000901.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MS94	-
ENSBTAT00000098134.2	CSDE1-203	4019	766aa	ENSBTAP00000101913.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TTF3	-
ENSBTAT00000117807.2	CSDE1-204	3348	696aa	ENSBTAP00000097596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TK76	-

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Summary

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