Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Gene: CPLANE1 ENSBTAG00000000586

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Description

ciliosis and planar polarity effector complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:59329]

Location

Primary_assembly 20: 37,042,132-37,150,381 forward strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 2 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000000774.8	CPLANE1-201	10338	3232aa	ENSBTAP00000000774.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MRT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000086915.3	CPLANE1-202	10176	3178aa	ENSBTAP00000068653.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NBG2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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