Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: ASCC1 ENSBTAG00000000392

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Description

activating signal cointegrator 1 complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:26203]

Location

Primary_assembly 28: 28,177,853-28,287,517 reverse strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 6 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000121139.1	ASCC1-201	2201	399aa	ENSBTAP00000077782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S3D4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000125170.1	ASCC1-202	2168	388aa	ENSBTAP00000102932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U034	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000000504.6	ASCC1-203	2023	388aa	ENSBTAP00000000504.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q2Y1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000131097.1	ASCC1-204	1810	317aa	ENSBTAP00000095973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGH4	-
ENSBTAT00000119580.1	ASCC1-206	1137	361aa	ENSBTAP00000095964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TB81	-
ENSBTAT00000125397.1	ASCC1-205	813	252aa	ENSBTAP00000097289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLW4	-

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Summary

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