Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MFAP5 ENSBTAG00000000310

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Description

microfibril associated protein 5 [Source:VGNC Symbol;Acc:VGNC:31425]

Location

Primary_assembly 5: 101,171,074-101,203,707 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 9 transcripts (splice variants), 185 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000101763.2	MFAP5-201	1405	249aa	ENSBTAP00000098689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000000398.8	MFAP5-202	1160	243aa	ENSBTAP00000000398.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T828	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000066989.3	MFAP5-204	917	159aa	ENSBTAP00000069742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MF64	-
ENSBTAT00000079286.3	MFAP5-205	914	158aa	ENSBTAP00000070352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGN3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000120811.2	MFAP5-207	899	160aa	ENSBTAP00000079261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S091	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000125974.2	MFAP5-206	884	148aa	ENSBTAP00000079471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6F7	-
ENSBTAT00000108291.2	MFAP5-209	797	160aa	ENSBTAP00000082732.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S9H6	-
ENSBTAT00000071514.2	MFAP5-208	760	148aa	ENSBTAP00000063617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT53	-
ENSBTAT00000091850.2	MFAP5-203	439	106aa	ENSBTAP00000075804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXD0	-

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Summary

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