Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PUDP ENSBTAG00000000207

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Description

pseudouridine 5'-phosphatase [Source:VGNC Symbol;Acc:VGNC:33568]

Gene Synonyms

HDHD1, HDHD1A

Location

Primary_assembly X: 135,626,564-135,693,952 forward strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 10 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000122736.2	PUDP-208	2340	342aa	ENSBTAP00000097418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000097666.1	PUDP-210	2296	268aa	ENSBTAP00000090497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1S3	-
ENSBTAT00000118640.1	PUDP-201	2287	265aa	ENSBTAP00000097437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJU6	-
ENSBTAT00000102822.2	PUDP-202	2203	226aa	ENSBTAP00000093737.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCA1	-
ENSBTAT00000000246.5	PUDP-209	2079	255aa	ENSBTAP00000000246.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R6G9	-
ENSBTAT00000125593.2	PUDP-206	1722	315aa	ENSBTAP00000079443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7Z9	-
ENSBTAT00000099649.2	PUDP-207	1670	215aa	ENSBTAP00000079100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZS2	-
ENSBTAT00000071814.3	PUDP-204	1004	209aa	ENSBTAP00000061542.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVT9	-
ENSBTAT00000115249.1	PUDP-203	912	227aa	ENSBTAP00000079314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAX0	-
ENSBTAT00000124293.2	PUDP-205	655	211aa	ENSBTAP00000080085.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4J5	-

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Summary

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