Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Phenotypes
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Gene: KMT5A ENSBTAG00000000139

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Description

lysine methyltransferase 5A [Source:VGNC Symbol;Acc:VGNC:53910]

Location

Primary_assembly 17: 52,210,529-52,228,329 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 5 transcripts (splice variants) and 105 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108316.1	KMT5A-203	2528	515aa	ENSBTAP00000098621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110188.1	KMT5A-204	2132	357aa	ENSBTAP00000103857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TYZ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000000160.7	KMT5A-205	2039	352aa	ENSBTAP00000000160.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFC8 Q2YDJ8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000063474.3	KMT5A-202	2021	346aa	ENSBTAP00000055591.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZQG1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097736.1	KMT5A-201	1930	318aa	ENSBTAP00000089865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STW5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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