Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CERT1 ENSBTAG00000000081

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Description

ceramide transporter 1 [Source:VGNC Symbol;Acc:VGNC:27566]

Gene Synonyms

COL4A3BP

Location

Primary_assembly 10: 6,796,764-6,925,601 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 6 transcripts (splice variants), 292 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000116228.1	CERT1-206	2507	782aa	ENSBTAP00000096545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TI02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000118485.1	CERT1-205	2403	759aa	ENSBTAP00000093224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T8S4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000119864.1	CERT1-201	2237	605aa	ENSBTAP00000084743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHC8	-
ENSBTAT00000056797.4	CERT1-203	2170	567aa	ENSBTAP00000049666.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZJB7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000000092.6	CERT1-204	2167	566aa	ENSBTAP00000000092.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YGZ3	-
ENSBTAT00000099611.1	CERT1-202	1989	580aa	ENSBTAP00000090116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXM8	-

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Summary

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