Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FCHSD2 ENSBTAG00000019062

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Description

FCH and double SH3 domains 2 [Source:VGNC Symbol;Acc:VGNC:28937]

Location

Primary_assembly 15: 52,371,212-52,631,708 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 6 transcripts (splice variants), 284 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025380.7	FCHSD2-205	3495	764aa	ENSBTAP00000025380.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MI02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000105524.1	FCHSD2-204	3441	746aa	ENSBTAP00000101323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000075434.2	FCHSD2-203	3423	740aa	ENSBTAP00000067392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N8L3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000074505.2	FCHSD2-201	3351	716aa	ENSBTAP00000060665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYF2	-
ENSBTAT00000069570.2	FCHSD2-206	3246	738aa	ENSBTAP00000061926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXJ3	-
ENSBTAT00000094579.1	FCHSD2-202	1307	101aa	ENSBTAP00000077545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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