Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A6 ENSBTAG00000012837

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Description

collagen type VI alpha 6 chain [Source:VGNC Symbol;Acc:VGNC:56214]

Location

Primary_assembly 1: 151,564,698-151,680,063 reverse strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 1 transcript (splice variant), 276 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017057.7	COL6A6-201	7845	2270aa	ENSBTAP00000017057.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MD40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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