Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: ALKBH1 ENSBTAG00000008133

.

Description

alkB homolog 1, histone H2A dioxygenase [Source:VGNC Symbol;Acc:VGNC:55101]

Location

Primary_assembly 10: 88,814,161-88,846,507 reverse strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000010693.5	ALKBH1-203	2541	389aa	ENSBTAP00000010693.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RQT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000126784.1	ALKBH1-204	1808	262aa	ENSBTAP00000102850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000094052.1	ALKBH1-201	1796	258aa	ENSBTAP00000102857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000097865.1	ALKBH1-202	835	233aa	ENSBTAP00000077208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data