Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: trim55a ENSAMXG00000019626

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Description

tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]

Location

Primary_assembly 17: 25,178,239-25,196,382 reverse strand.

Astyanax_mexicanus-2.0:CM008316.1

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 168 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000020207.2	trim55a-202	2324	468aa	ENSAMXP00000020207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8B9R256 W5LK45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000049570.1	trim55a-201	4060	461aa	ENSAMXP00000052047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KBF2	-
ENSAMXT00000048181.1	trim55a-203	1056	351aa	ENSAMXP00000052565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KEU9	-

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Summary

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