Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB1 ENSAMXG00000043380

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Description

SATB homeobox 1 [Source:UniProtKB Gene Name;Acc:A0A8T2MPN4]

Location

Primary_assembly 18: 31,687,981-31,804,931 forward strand.

Astyanax_mexicanus-2.0:CM008317.1

About this gene

This gene has 8 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000044757.1	SATB1-203	7583	856aa	ENSAMXP00000052943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KEK4 A0A8T2MPN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000042408.1	SATB1-204	7511	832aa	ENSAMXP00000043664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JQN9	-
ENSAMXT00000039107.1	SATB1-205	7505	830aa	ENSAMXP00000034984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1J0T9	-
ENSAMXT00000057860.1	SATB1-206	7349	778aa	ENSAMXP00000046934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JZX8	-
ENSAMXT00000045376.1	SATB1-207	7277	754aa	ENSAMXP00000046782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JWH1	-
ENSAMXT00000033129.1	SATB1-201	7228	856aa	ENSAMXP00000033230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KEK4 A0A8T2MPN4	-
ENSAMXT00000052698.1	SATB1-202	7189	849aa	ENSAMXP00000044331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JRF8	-
ENSAMXT00000015616.2	SATB1-208	2325	774aa	ENSAMXP00000015616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8B9H0B1 W5L704	-

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Summary

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