Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: kdm5c ENSAMXG00000012757

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Description

lysine demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]

Location

Primary_assembly 6: 40,096,068-40,123,879 forward strand.

Astyanax_mexicanus-2.0:CM008305.1

About this gene

This gene has 5 transcripts (splice variants), 117 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000042043.1	kdm5c-203	5547	1579aa	ENSAMXP00000045675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5L028	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000032832.1	kdm5c-201	5520	1570aa	ENSAMXP00000035424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1J230	-
ENSAMXT00000041034.1	kdm5c-202	5463	1551aa	ENSAMXP00000045564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JW51	-
ENSAMXT00000013190.2	kdm5c-204	5022	1579aa	ENSAMXP00000013190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5L028	-
ENSAMXT00000048993.1	kdm5c-205	3484	1161aa	ENSAMXP00000044757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JQT5	-

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Summary

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