Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: snrnp40 ENSAMXG00000020599

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Description

small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]

Gene Synonyms

SNRNP40

Location

Primary_assembly 23: 29,006,699-29,014,852 forward strand.

Astyanax_mexicanus-2.0:CM008322.1

About this gene

This gene has 2 transcripts (splice variants), 219 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000048425.1	snrnp40-201	1137	378aa	ENSAMXP00000038728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1J931	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000021212.2	snrnp40-202	1044	347aa	ENSAMXP00000021212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8B9L480 W5LN00	-

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Summary

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