Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: usp40 ENSAMXG00000010176

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Description

ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]

Location

Primary_assembly 13: 1,029,508-1,047,698 reverse strand.

Astyanax_mexicanus-2.0:CM008312.1

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 48 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000054751.1	usp40-201	7206	1259aa	ENSAMXP00000044437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5KS87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000010449.2	usp40-202	6749	1259aa	ENSAMXP00000010449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5KS87	-
ENSAMXT00000042020.1	usp40-203	6683	1237aa	ENSAMXP00000051951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KDG2	-
ENSAMXT00000048575.1	usp40-204	3474	1157aa	ENSAMXP00000045093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JS40	-

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Summary

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