Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG5 ENSACLG00000009311

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Description

SMG5 nonsense mediated mRNA decay factor [Ensembl NN prediction with score 99.99%]

Location

Primary_assembly 11: 32,947,201-32,968,943 forward strand.

fAstCal1.3:LS420029.1

About this gene

This gene has 8 transcripts (splice variants), 208 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSACLT00000081036.1	SMG5-204	4608	1135aa	ENSACLP00000058308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSACLT00000070082.1	SMG5-205	4572	1123aa	ENSACLP00000053380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000046149.1	SMG5-206	4506	1101aa	ENSACLP00000072441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000048449.1	SMG5-207	4434	1077aa	ENSACLP00000085437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000013995.2	SMG5-201	4293	1030aa	ENSACLP00000013661.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8P9G0	-
ENSACLT00000066061.1	SMG5-202	4248	1015aa	ENSACLP00000045851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000014022.2	SMG5-208	4244	1071aa	ENSACLP00000013689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8P9K0	-
ENSACLT00000013999.2	SMG5-203	3532	1084aa	ENSACLP00000013665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8P9J6	-

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Summary

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