Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSACLG00000007181

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Description

UPF1 RNA helicase and ATPase [Ensembl NN prediction with score 100%]

Location

Primary_assembly 18: 22,908,345-22,918,010 reverse strand.

fAstCal1.3:LS420036.1

About this gene

This gene has 6 transcripts (splice variants), 181 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSACLT00000096036.1	UPF1-202	3528	1109aa	ENSACLP00000043347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSACLT00000054241.1	UPF1-203	3489	1096aa	ENSACLP00000042618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000010792.2	UPF1-201	3297	1097aa	ENSACLP00000010541.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8P0K4	-
ENSACLT00000056163.1	UPF1-204	2433	744aa	ENSACLP00000063572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000057787.1	UPF1-205	1114	299aa	ENSACLP00000048882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000078076.1	UPF1-206	1042	275aa	ENSACLP00000045378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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