Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: plod1a ENSACLG00000002498

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Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Ensembl NN prediction with score 99.97%]

Location

Primary_assembly 20: 12,343,023-12,375,559 reverse strand.

fAstCal1.3:LS420038.1

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSACLT00000050599.1	plod1a-202	3200	732aa	ENSACLP00000086389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSACLT00000003825.2	plod1a-210	3440	728aa	ENSACLP00000003742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8NG66	-
ENSACLT00000048674.1	plod1a-209	3267	688aa	ENSACLP00000046813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000073517.1	plod1a-206	3176	724aa	ENSACLP00000076482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000089972.1	plod1a-205	3164	720aa	ENSACLP00000047482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000044803.1	plod1a-207	3164	720aa	ENSACLP00000046273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000046923.1	plod1a-203	3158	718aa	ENSACLP00000042161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000050390.1	plod1a-204	3155	717aa	ENSACLP00000076942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000052602.1	plod1a-201	3152	716aa	ENSACLP00000069652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSACLT00000072080.1	plod1a-208	3116	704aa	ENSACLP00000068916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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