Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ptbp1a ENSAOCG00000019831

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Description

polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]

Location

Primary_assembly 20: 8,020,658-8,033,900 reverse strand.

ASM2253959v1:CM040080.1

About this gene

This gene has 10 transcripts (splice variants), 248 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAOCT00000046421.1	ptbp1a-204	2801	599aa	ENSAOCP00000066846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAOCT00000023678.2	ptbp1a-208	2807	576aa	ENSAOCP00000029514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1CVB5	-
ENSAOCT00000069953.1	ptbp1a-209	2735	552aa	ENSAOCP00000038499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000084081.1	ptbp1a-205	2729	575aa	ENSAOCP00000061103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000049345.1	ptbp1a-206	2708	568aa	ENSAOCP00000043584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000075189.1	ptbp1a-210	2675	495aa	ENSAOCP00000064170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000049479.1	ptbp1a-207	2612	536aa	ENSAOCP00000057020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000055281.1	ptbp1a-202	2609	535aa	ENSAOCP00000075053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000069270.1	ptbp1a-203	2576	524aa	ENSAOCP00000059858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000066230.1	ptbp1a-201	2564	520aa	ENSAOCP00000037387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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