Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: plod1a ENSAOCG00000018734

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Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Ensembl NN prediction with score 95.47%]

Location

Primary_assembly 8: 13,499,536-13,525,474 reverse strand.

ASM2253959v1:CM040068.1

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAOCT00000077943.1	plod1a-207	3473	823aa	ENSAOCP00000073261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAOCT00000073242.1	plod1a-208	3528	775aa	ENSAOCP00000058814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000045836.1	plod1a-209	3402	733aa	ENSAOCP00000055911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000075963.1	plod1a-206	3401	799aa	ENSAOCP00000045111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000033809.1	plod1a-205	3398	798aa	ENSAOCP00000056776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000046484.1	plod1a-210	3306	701aa	ENSAOCP00000043204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000022293.2	plod1a-202	3203	733aa	ENSAOCP00000014062.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1BI11	-
ENSAOCT00000072561.1	plod1a-201	3185	727aa	ENSAOCP00000058022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000022286.2	plod1a-204	3176	724aa	ENSAOCP00000028799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1CTF0	-
ENSAOCT00000037733.1	plod1a-203	3140	712aa	ENSAOCP00000065155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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