Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSAOCG00000018519

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Description

UPF1 RNA helicase and ATPase [Ensembl NN prediction with score 100%]

Location

Primary_assembly 10: 12,692,239-12,703,323 forward strand.

ASM2253959v1:CM040070.1

About this gene

This gene has 5 transcripts (splice variants), 181 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAOCT00000022019.2	UPF1-202	3544	1113aa	ENSAOCP00000013856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1BZS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAOCT00000021979.2	UPF1-203	3541	1112aa	ENSAOCP00000013834.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1BM41	-
ENSAOCT00000044296.1	UPF1-204	2458	751aa	ENSAOCP00000072730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000083871.1	UPF1-201	1102	300aa	ENSAOCP00000035795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000041944.1	UPF1-205	1048	281aa	ENSAOCP00000038083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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