Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCAL1 ENSAOCG00000014266

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Ensembl NN prediction with score 100%]

Location

Primary_assembly 11: 11,540,769-11,559,953 reverse strand.

ASM2253959v1:CM040071.1

About this gene

This gene has 5 transcripts (splice variants), 194 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAOCT00000053682.1	SMARCAL1-202	3160	919aa	ENSAOCP00000074253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAOCT00000016989.2	SMARCAL1-201	2999	899aa	ENSAOCP00000010049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1BBZ3	-
ENSAOCT00000073784.1	SMARCAL1-203	2774	917aa	ENSAOCP00000046670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000072792.1	SMARCAL1-205	2481	826aa	ENSAOCP00000067389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000059512.1	SMARCAL1-204	2274	757aa	ENSAOCP00000037149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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