Tyrosine-protein phosphatase [Source:NCBI gene;Acc:174359]
Chromosome II: 8,487,513-8,509,056 reverse strand.
WBcel235:BX284602.5
This gene has 10 transcripts (splice variants), 7 orthologues and 55 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T13H5.1a.1 | - | 3063 | 845aa | T13H5.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGI0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1c.1 | - | 3058 | 864aa | T13H5.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EC69 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T13H5.1d.1 | - | 2972 | 732aa | T13H5.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGJ3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1f.2 | - | 2752 | 794aa | T13H5.1f.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEM4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1f.1 | - | 2520 | 794aa | T13H5.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEM4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1e.1 | - | 2495 | 705aa | T13H5.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGM6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1g.1 | T13H5.1-210 | 2406 | 801aa | T13H5.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECI6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1b.1 | - | 2285 | 753aa | T13H5.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFE8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1h.1 | - | 2091 | 696aa | T13H5.1h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EG42 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T13H5.1i.1 | - | 588 | 195aa | T13H5.1i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GU90 | - |
