C-type lectin domain-containing protein [Source:NCBI gene;Acc:183064]
Chromosome IV: 17,351,886-17,358,097 forward strand.
WBcel235:BX284604.4
This gene has 16 transcripts (splice variants), 532 orthologues and 11 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| C30H6.1a.1 | - | 2230 | 657aa | C30H6.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C6KRM5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1c.1 | clec-199-214 | 2004 | 667aa | C30H6.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3KFV8 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| C30H6.1g.1 | clec-199-211 | 1971 | 656aa | C30H6.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AS08 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1h.1 | clec-199-210 | 1965 | 654aa | C30H6.1h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUC7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1d.1 | clec-199-213 | 1962 | 653aa | C30H6.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3KFV9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1l.1 | - | 1941 | 646aa | C30H6.1l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AS12 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1n.1 | - | 1935 | 644aa | C30H6.1n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ARH5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1b.1 | clec-199-215 | 1932 | 643aa | C30H6.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C6KRM6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1j.1 | - | 1932 | 643aa | C30H6.1j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AV02 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1e.1 | clec-199-212 | 1929 | 642aa | C30H6.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2L2E0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1i.1 | - | 1923 | 640aa | C30H6.1i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ARH0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1p.1 | - | 1902 | 633aa | C30H6.1p.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AXC6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1m.1 | - | 1899 | 632aa | C30H6.1m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUD0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1o.1 | - | 1893 | 630aa | C30H6.1o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AV10 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1k.1 | - | 1890 | 629aa | C30H6.1k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AXC2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C30H6.1q.1 | clec-199-216 | 1860 | 619aa | C30H6.1q.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AS16 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
