HTH La-type RNA-binding domain-containing protein [Source:NCBI gene;Acc:171942]
Chromosome I: 3,732,860-3,740,485 reverse strand.
WBcel235:BX284601.5
This gene has 6 transcripts (splice variants), 1271 orthologues and 2 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T12F5.5a.2 | - | 3895 | 760aa | T12F5.5a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O44760 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| T12F5.5a.1 | - | 3367 | 760aa | T12F5.5a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O44760 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| T12F5.5b.2 | - | 3232 | 696aa | T12F5.5b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T12F5.5b.4 | - | 3001 | 696aa | T12F5.5b.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T12F5.5b.3 | - | 2845 | 696aa | T12F5.5b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T12F5.5b.1 | - | 2811 | 696aa | T12F5.5b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZU0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
