Nuclear factor I family protein [Source:NCBI gene;Acc:174225]
Chromosome II: 7,538,180-7,543,007 forward strand.
WBcel235:BX284602.5
This gene has 5 transcripts (splice variants) and 938 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ZK1290.4b.3 | - | 3179 | 787aa | ZK1290.4b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5H9N3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ZK1290.4b.2 | - | 3090 | 787aa | ZK1290.4b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5H9N3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ZK1290.4b.1 | - | 3023 | 787aa | ZK1290.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5H9N3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ZK1290.4a.1 | - | 2993 | 807aa | ZK1290.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5H9N3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ZK1290.4c.1 | - | 2472 | 823aa | ZK1290.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5H9N3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
