LIM zinc-binding domain-containing protein [Source:NCBI gene;Acc:175847]
Chromosome III: 5,971,527-5,975,055 reverse strand.
WBcel235:BX284603.4
This gene has 7 transcripts (splice variants) and 692 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T04C9.4a.2 | - | 1310 | 95aa | T04C9.4a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9GP94 | - |
| T04C9.4a.1 | - | 592 | 95aa | T04C9.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9GP94 | - |
| T04C9.4c.2 | - | 572 | 115aa | T04C9.4c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9GP96 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T04C9.4b.1 | - | 538 | 113aa | T04C9.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZV8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T04C9.4c.1 | - | 537 | 115aa | T04C9.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9GP96 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T04C9.4d.1 | - | 520 | 106aa | T04C9.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | L8E6X8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T04C9.4a.3 | - | 347 | 95aa | T04C9.4a.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9GP94 | - |
