Calcium-transporting ATPase [Source:NCBI gene;Acc:177089]
Chromosome IV: 3,103,157-3,133,149 reverse strand.
WBcel235:BX284604.4
This gene has 11 transcripts (splice variants), 583 orthologues and 9 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| Y67D8C.10b.1 | mca-3-210 | 4601 | 1234aa | Y67D8C.10b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y67D8C.10b.2 | - | 4509 | 1234aa | Y67D8C.10b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y67D8C.10b.3 | - | 4451 | 1234aa | Y67D8C.10b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y67D8C.10a.1 | - | 4405 | 1160aa | Y67D8C.10a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP6 | - |
| Y67D8C.10b.4 | - | 4388 | 1234aa | Y67D8C.10b.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y67D8C.10c.1 | - | 4334 | 1137aa | Y67D8C.10c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MXS0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y67D8C.10a.2 | - | 3878 | 1160aa | Y67D8C.10a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP6 | - |
| Y67D8C.10a.3 | - | 3757 | 1160aa | Y67D8C.10a.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP6 | - |
| Y67D8C.10a.4 | - | 3709 | 1160aa | Y67D8C.10a.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95XP6 | - |
| Y67D8C.10d.1 | - | 3576 | 1170aa | Y67D8C.10d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7CED8 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| Y67D8C.10e.1 | mca-3-211 | 3084 | 1027aa | Y67D8C.10e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PMD6 | - |
