BTB domain-containing protein [Source:NCBI gene;Acc:176775]
Chromosome III: 13,464,820-13,471,350 forward strand.
WBcel235:BX284603.4
This gene has 4 transcripts (splice variants), 196 orthologues and 10 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T27E9.4b.2 | - | 1926 | 591aa | T27E9.4b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8WQC4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T27E9.4a.1 | - | 1906 | 589aa | T27E9.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O18147 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T27E9.4b.1 | - | 1817 | 591aa | T27E9.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8WQC4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T27E9.4a.2 | - | 1814 | 589aa | T27E9.4a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O18147 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
