Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lrp1 MGP_PahariEiJ_G0031184

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Description

LDL receptor related protein 1 [Source:NCBI gene;Acc:110326058]

Location

Chromosome 9: 49,480,037-49,564,983 forward strand.

PAHARI_EIJ_v1.1:LT608291.1

About this gene

This gene has 11 transcripts (splice variants), 270 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0087618.1	Lrp1-203	14898	4545aa	MGP_PahariEiJ_P0087618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0087619.1	Lrp1-204	2889	743aa	MGP_PahariEiJ_P0087619	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0087620.1	Lrp1-205	2251	326aa	MGP_PahariEiJ_P0087620	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0087621.1	Lrp1-206	292	97aa	MGP_PahariEiJ_P0087621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0087623.1	Lrp1-208	679	13aa	MGP_PahariEiJ_P0087623	Nonsense mediated decay	-
MGP_PahariEiJ_T0087617.1	Lrp1-202	3437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087625.1	Lrp1-210	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087626.1	Lrp1-211	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087624.1	Lrp1-209	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087622.1	Lrp1-207	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0087616.1	Lrp1-201	15074	4545aa	MGP_PahariEiJ_P0087616	Unknown likely coding	-

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Summary

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