Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cntn2 MGP_PahariEiJ_G0027826

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Description

contactin 2 [Source:NCBI gene;Acc:110321338]

Location

Chromosome 5: 106,756,658-106,790,159 reverse strand.

PAHARI_EIJ_v1.1:LT608292.1

About this gene

This gene has 7 transcripts (splice variants), 220 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0075126.1	Cntn2-203	7134	1040aa	MGP_PahariEiJ_P0075126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0075129.1	Cntn2-206	461	102aa	MGP_PahariEiJ_P0075129	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0075130.1	Cntn2-207	309	25aa	MGP_PahariEiJ_P0075130	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0075124.1	Cntn2-201	4201	543aa	MGP_PahariEiJ_P0075124	Nonsense mediated decay	-
MGP_PahariEiJ_T0075125.1	Cntn2-202	7199	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0075127.1	Cntn2-204	7101	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0075128.1	Cntn2-205	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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