Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nlgn1 MGP_PahariEiJ_G0026330

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Description

neuroligin 1 [Source:NCBI gene;Acc:110320059]

Location

Chromosome 4: 20,405,438-21,278,067 reverse strand.

PAHARI_EIJ_v1.1:LT608287.1

About this gene

This gene has 5 transcripts (splice variants), 267 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0068068.1	Nlgn1-201	11745	843aa	MGP_PahariEiJ_P0068068	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0068069.1	Nlgn1-202	4359	843aa	MGP_PahariEiJ_P0068069	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068070.1	Nlgn1-203	4272	814aa	MGP_PahariEiJ_P0068070	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068071.1	Nlgn1-204	3029	814aa	MGP_PahariEiJ_P0068071	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068072.1	Nlgn1-205	3324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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