Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Spopl MGP_PahariEiJ_G0024686

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Description

speckle type BTB/POZ protein like [Source:NCBI gene;Acc:110318345]

Location

Chromosome 3: 10,571,853-10,632,413 reverse strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 5 transcripts (splice variants), 225 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0060925.1	Spopl-201	5366	392aa	MGP_PahariEiJ_P0060925	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0060926.1	Spopl-202	2068	155aa	MGP_PahariEiJ_P0060926	Nonsense mediated decay	-
MGP_PahariEiJ_T0060927.1	Spopl-203	1515	189aa	MGP_PahariEiJ_P0060927	Nonsense mediated decay	-
MGP_PahariEiJ_T0060929.1	Spopl-205	684	72aa	MGP_PahariEiJ_P0060929	Nonsense mediated decay	-
MGP_PahariEiJ_T0060928.1	Spopl-204	245	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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