Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Smurf1 MGP_PahariEiJ_G0024574

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Description

SMAD specific E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:110339179]

Location

Chromosome 23: 34,932,230-35,021,810 reverse strand.

PAHARI_EIJ_v1.1:LT608309.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0060314.1	Smurf1-202	5417	757aa	MGP_PahariEiJ_P0060314	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0060315.1	Smurf1-203	5340	731aa	MGP_PahariEiJ_P0060315	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060316.1	Smurf1-204	2725	728aa	MGP_PahariEiJ_P0060316	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060317.1	Smurf1-205	927	308aa	MGP_PahariEiJ_P0060317	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060313.1	Smurf1-201	4670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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