Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prkab1 MGP_PahariEiJ_G0024215

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Description

protein kinase AMP-activated non-catalytic subunit beta 1 [Source:NCBI gene;Acc:110312867]

Location

Chromosome 23: 5,872,245-5,883,258 reverse strand.

PAHARI_EIJ_v1.1:LT608309.1

About this gene

This gene has 9 transcripts (splice variants), 283 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0058436.1	Prkab1-201	2109	270aa	MGP_PahariEiJ_P0058436	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0058437.1	Prkab1-202	2028	270aa	MGP_PahariEiJ_P0058437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0058440.1	Prkab1-205	1038	176aa	MGP_PahariEiJ_P0058440	Nonsense mediated decay	-
MGP_PahariEiJ_T0058441.1	Prkab1-206	795	176aa	MGP_PahariEiJ_P0058441	Nonsense mediated decay	-
MGP_PahariEiJ_T0058442.1	Prkab1-207	855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0058438.1	Prkab1-203	800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0058439.1	Prkab1-204	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0058443.1	Prkab1-208	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0058444.1	Prkab1-209	478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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