Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Mmp16 MGP_PahariEiJ_G0023954

.

Description

matrix metallopeptidase 16 [Source:NCBI gene;Acc:110338693]

Location

Chromosome 22: 26,181,992-26,414,421 forward strand.

PAHARI_EIJ_v1.1:LT608303.1

About this gene

This gene has 5 transcripts (splice variants), 268 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0057193.1	Mmp16-203	5033	607aa	MGP_PahariEiJ_P0057193	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0057192.1	Mmp16-202	845	127aa	MGP_PahariEiJ_P0057192	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057191.1	Mmp16-201	3465	415aa	MGP_PahariEiJ_P0057191	Nonsense mediated decay	-
MGP_PahariEiJ_T0057194.1	Mmp16-204	3781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0057195.1	Mmp16-205	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.