Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chd7 MGP_PahariEiJ_G0023920

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Description

chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:110338932]

Location

Chromosome 22: 17,939,879-18,121,005 forward strand.

PAHARI_EIJ_v1.1:LT608303.1

About this gene

This gene has 8 transcripts (splice variants), 209 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0057041.1	Chd7-204	10370	2986aa	MGP_PahariEiJ_P0057041	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0057040.1	Chd7-203	9453	2986aa	MGP_PahariEiJ_P0057040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057043.1	Chd7-206	3483	941aa	MGP_PahariEiJ_P0057043	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057039.1	Chd7-202	2393	631aa	MGP_PahariEiJ_P0057039	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057042.1	Chd7-205	466	19aa	MGP_PahariEiJ_P0057042	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057045.1	Chd7-208	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0057038.1	Chd7-201	4476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0057044.1	Chd7-207	8958	2985aa	MGP_PahariEiJ_P0057044	Unknown likely coding	-

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Summary

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