Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: St18 MGP_PahariEiJ_G0023886

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Description

ST18 C2H2C-type zinc finger transcription factor [Source:NCBI gene;Acc:110338697]

Location

Chromosome 22: 10,037,249-10,383,918 reverse strand.

PAHARI_EIJ_v1.1:LT608303.1

About this gene

This gene has 13 transcripts (splice variants), 210 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0056882.1	St18-204	5869	1045aa	MGP_PahariEiJ_P0056882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0056881.1	St18-203	5839	1045aa	MGP_PahariEiJ_P0056881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056880.1	St18-202	5697	1045aa	MGP_PahariEiJ_P0056880	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056879.1	St18-201	5581	1045aa	MGP_PahariEiJ_P0056879	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056884.1	St18-206	4259	1045aa	MGP_PahariEiJ_P0056884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056885.1	St18-207	3535	1045aa	MGP_PahariEiJ_P0056885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056889.1	St18-211	792	215aa	MGP_PahariEiJ_P0056889	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056883.1	St18-205	713	92aa	MGP_PahariEiJ_P0056883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056890.1	St18-212	585	83aa	MGP_PahariEiJ_P0056890	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056891.1	St18-213	435	41aa	MGP_PahariEiJ_P0056891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056888.1	St18-210	714	107aa	MGP_PahariEiJ_P0056888	Nonsense mediated decay	-
MGP_PahariEiJ_T0056886.1	St18-208	817	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0056887.1	St18-209	445	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Summary

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