Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pknox1 MGP_PahariEiJ_G0023689

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Description

PBX/knotted 1 homeobox 1 [Source:NCBI gene;Acc:110338072]

Location

Chromosome 21: 26,566,786-26,611,847 forward strand.

PAHARI_EIJ_v1.1:LT608306.1

About this gene

This gene has 6 transcripts (splice variants), 239 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0056147.1	Pknox1-202	4235	435aa	MGP_PahariEiJ_P0056147	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0056148.1	Pknox1-203	4092	435aa	MGP_PahariEiJ_P0056148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056146.1	Pknox1-201	2129	435aa	MGP_PahariEiJ_P0056146	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0056149.1	Pknox1-204	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0056150.1	Pknox1-205	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0056151.1	Pknox1-206	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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